Adam Hockenberry

Graduate Student

Interdisciplinary Biological Sciences (IBiS) Program
2205 Tech Drive (Room 2-108)
Evanston, IL 60208, US

Publications by Date

Within-gene Shine–Dalgarno sequences are not selected for function
Hockenberry AJ, Jewett MC, Amaral LAN, Wilke CO
Molecular Biology and Evolution 35, 2487-2498 (2018)
A novel framework for evaluating the performance of codon usage bias metrics
Liu SS, Hockenberry HJ, Jewett MC, Amaral LAN
Journal of the Royal Society Interface 15, 0170667 (2018)
Diversity of translation initiation mechanisms across bacterial species is driven by environmental conditions and growth demands
Hockenberry AJ, Stern AJ, Amaral LAN, Jewett MC
Molecular Biology and Evolution 35, 582-592 (2017)
Leveraging genome-wide datasets to quantify the functional role of the anti-Shine–Dalgarno sequence in regulating translation efficiency
Hockenberry AJ, Pah AR, Jewett MC, Amaral LAN
Open Biology 7, 160239 (2017)
Economic insecurity and the rise in gun violence at US schools
Pah AR, Hagan J, Jennings AL, Jain A, Albrecht K, Hockenberry AJ, Amaral LAN
Nature Human Behavior 1, 0040 (2017)
NullSeq: A tool for generating random coding sequences with desired amino acid and GC contents
Liu SS, Hockenberry AJ, Lancichinetti A, Jewett MC, Amaral LAN
PLOS Computational Biology 12, 1005184 (2016)
Depletion of Shine-Dalgarno sequences within bacterial coding regions Is expression dependent
Yang C, Hockenberry AJ, Jewett MC, Amaral LAN
G3 : Genes | Genomes | Genetics 6, 3467-3474 (2016)
Quantifying position-dependent codon usage bias
Hockenberry AJ, Sirer MI, Amaral LAN, Jewett MC
Molecular Biology and Evolution 31(7), 1880-1893 (2014)
Times cited: 2
Synthetic in vitro circuits
Adam J Hockenberry, Michael C Jewett
Current Opinion in Chemical Biology, 1-7 (2012)
Times cited: 22
NR2A and NR2B subunits differentially mediate MAP kinase signaling and mitochondrial morphology following excitotoxic insult
Anthony M. Choo, Donna M. Geddes-Klein, Adam Hockenberry, David Scarsella, Mahlet N. Mesfin, Pallab Singh, Tapan P. Patel, David F. Meaney
Neurochemistry International 60, 5:506-516 (2012)
Times cited: 17
N-Methyl-D-aspartate Receptor Mechanosensitivity Is Governed by C Terminus of NR2B Subunit
Pallab Singh, Shachee Doshi, Jennifer M. Spaethling, Adam J. Hockenberry, Tapan P. Patel, Donna M. Geddes-Klein, David R. Lynch and David F. Meaney
The Journal of Biological Chemistry 287, 4348-4359 (2012)
Times cited: 14
Computational investigation of the changing patterns of subtype specific NMDA receptor activation during physiological glutamatergic neurotransmission
Pallab Singh, Adam J. Hockenberry, Vineet R. Tiruvadi, David F. Meaney
PLoS Computational Biology 7, 6 (2011)
Times cited: 8